Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 AC010327.4-202ENST00000591484 748 ntBASIC16.61■□□□□ 0.25
CCDC88CQ9P219 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC88CQ9P219 CROCCP2-202ENST00000412962 2773 ntBASIC16.61■□□□□ 0.25
CCDC88CQ9P219 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 AC034105.1-201ENST00000563488 319 ntBASIC16.6■□□□□ 0.25
CCDC88CQ9P219 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 AC022898.2-201ENST00000616822 1312 ntBASIC16.6■□□□□ 0.25
CCDC88CQ9P219 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 TERC-201ENST00000602385 541 ntBASIC16.6■□□□□ 0.25
CCDC88CQ9P219 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC88CQ9P219 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AC007967.2-201ENST00000432613 625 ntBASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AC122714.2-201ENST00000502787 707 ntBASIC16.59■□□□□ 0.25
CCDC88CQ9P219 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AC097374.2-201ENST00000618617 1306 ntBASIC16.59■□□□□ 0.25
CCDC88CQ9P219 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 BX276092.7-203ENST00000637198 1536 ntBASIC16.59■□□□□ 0.25
CCDC88CQ9P219 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC88CQ9P219 NCF1C-201ENST00000438382 1427 ntBASIC16.59■□□□□ 0.25
CCDC88CQ9P219 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC88CQ9P219 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC88CQ9P219 AC098831.1-202ENST00000438821 336 ntBASIC16.58■□□□□ 0.25
CCDC88CQ9P219 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.58■□□□□ 0.25
CCDC88CQ9P219 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.58■□□□□ 0.25
CCDC88CQ9P219 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms