Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.43□□□□□ -0.1
CALYQ9NYX4 AL353593.2-201ENST00000602529 1483 ntBASIC14.43□□□□□ -0.1
CALYQ9NYX4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CALYQ9NYX4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.43□□□□□ -0.1
CALYQ9NYX4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CALYQ9NYX4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CALYQ9NYX4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.42□□□□□ -0.1
CALYQ9NYX4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 AC012313.1-201ENST00000593393 3059 ntBASIC14.42□□□□□ -0.1
CALYQ9NYX4 AP001094.4-201ENST00000579008 2176 ntBASIC14.42□□□□□ -0.1
CALYQ9NYX4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 AC114341.1-201ENST00000618070 349 ntBASIC14.42□□□□□ -0.1
CALYQ9NYX4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.42□□□□□ -0.1
CALYQ9NYX4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CALYQ9NYX4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 INTS4P1-201ENST00000438455 1935 ntBASIC14.41□□□□□ -0.1
CALYQ9NYX4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 RCN1P2-201ENST00000398357 915 ntBASIC14.41□□□□□ -0.1
CALYQ9NYX4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 POM121L3P-201ENST00000419331 1163 ntBASIC14.41□□□□□ -0.1
CALYQ9NYX4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 STK19B-204ENST00000512515 211 ntBASIC14.41□□□□□ -0.1
CALYQ9NYX4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 AC099336.1-202ENST00000602961 463 ntBASIC14.41□□□□□ -0.1
CALYQ9NYX4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 AC116353.5-201ENST00000638148 1699 ntBASIC14.41□□□□□ -0.1
CALYQ9NYX4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.41□□□□□ -0.1
CALYQ9NYX4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CALYQ9NYX4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CALYQ9NYX4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CALYQ9NYX4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CALYQ9NYX4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CALYQ9NYX4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CALYQ9NYX4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.4□□□□□ -0.1
CALYQ9NYX4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CALYQ9NYX4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms