Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 STK25P1-201ENST00000585406 838 ntBASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 AC064862.7-201ENST00000604520 867 ntBASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CUEDC1Q9NWM3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 REXO1L6P-202ENST00000619970 1078 ntBASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 AP005117.1-201ENST00000584346 1413 ntBASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 AL138688.1-201ENST00000624851 1594 ntBASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CUEDC1Q9NWM3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 MYCLP1-201ENST00000372451 1075 ntBASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 KLF4P1-201ENST00000412782 1185 ntBASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 AL671883.3-201ENST00000603274 991 ntBASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 AC141586.5-201ENST00000624546 2050 ntBASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CUEDC1Q9NWM3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CUEDC1Q9NWM3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CUEDC1Q9NWM3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CUEDC1Q9NWM3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.83■□□□□ 0.29
CUEDC1Q9NWM3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CUEDC1Q9NWM3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 AL590627.1-203ENST00000421194 1026 ntBASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 STK19B-204ENST00000512515 211 ntBASIC16.83■□□□□ 0.28
CUEDC1Q9NWM3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms