Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AC092183.1-201ENST00000469884 875 ntBASIC20.9■□□□□ 0.94
SALL1Q9NSC2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.9■□□□□ 0.94
SALL1Q9NSC2 AC096734.2-201ENST00000562054 433 ntBASIC20.9■□□□□ 0.94
SALL1Q9NSC2 AC018845.2-201ENST00000568326 409 ntBASIC20.9■□□□□ 0.94
SALL1Q9NSC2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.9■□□□□ 0.94
SALL1Q9NSC2 AC010507.1-201ENST00000633895 436 ntBASIC20.9■□□□□ 0.94
SALL1Q9NSC2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SALL1Q9NSC2 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.9■□□□□ 0.94
SALL1Q9NSC2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SALL1Q9NSC2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SALL1Q9NSC2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 PAWRP1-201ENST00000451083 565 ntBASIC20.89■□□□□ 0.93
SALL1Q9NSC2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 AL691403.2-201ENST00000618460 490 ntBASIC20.89■□□□□ 0.93
SALL1Q9NSC2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL1Q9NSC2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 PP12613-201ENST00000424958 2230 ntBASIC20.88■□□□□ 0.93
SALL1Q9NSC2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 YBX1P5-201ENST00000509441 847 ntBASIC20.88■□□□□ 0.93
SALL1Q9NSC2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 AL513190.1-201ENST00000621254 727 ntBASIC20.88■□□□□ 0.93
SALL1Q9NSC2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL1Q9NSC2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 PI4KAP1-204ENST00000612579 1703 ntBASIC20.87■□□□□ 0.93
SALL1Q9NSC2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL1Q9NSC2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 AC004967.1-201ENST00000453589 447 ntBASIC20.86■□□□□ 0.93
SALL1Q9NSC2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 PDPK2P-202ENST00000562415 1191 ntBASIC20.86■□□□□ 0.93
SALL1Q9NSC2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.86■□□□□ 0.93
SALL1Q9NSC2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms