Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VTA1Q9NP79 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.35■□□□□ 0.69
VTA1Q9NP79 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 AC002056.1-201ENST00000395613 760 ntBASIC19.35■□□□□ 0.69
VTA1Q9NP79 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 AC022145.2-201ENST00000598203 171 ntBASIC19.35■□□□□ 0.69
VTA1Q9NP79 AL645728.2-201ENST00000641974 660 ntBASIC19.35■□□□□ 0.69
VTA1Q9NP79 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VTA1Q9NP79 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.35■□□□□ 0.69
VTA1Q9NP79 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 AL139400.1-201ENST00000366220 510 ntBASIC19.34■□□□□ 0.69
VTA1Q9NP79 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 ADH5P3-201ENST00000433842 1137 ntBASIC19.34■□□□□ 0.69
VTA1Q9NP79 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 AC107918.2-201ENST00000530817 355 ntBASIC19.34■□□□□ 0.69
VTA1Q9NP79 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.34■□□□□ 0.69
VTA1Q9NP79 LINC02084-201ENST00000606069 1096 ntBASIC19.34■□□□□ 0.69
VTA1Q9NP79 AC093028.1-201ENST00000622998 982 ntBASIC19.34■□□□□ 0.69
VTA1Q9NP79 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 AC138932.1-201ENST00000534164 6830 ntBASIC19.34■□□□□ 0.69
VTA1Q9NP79 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
VTA1Q9NP79 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTA1Q9NP79 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
VTA1Q9NP79 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VTA1Q9NP79 AC087289.5-201ENST00000586076 3175 ntBASIC19.33■□□□□ 0.69
VTA1Q9NP79 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.33■□□□□ 0.69
VTA1Q9NP79 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.33■□□□□ 0.68
VTA1Q9NP79 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
VTA1Q9NP79 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.33■□□□□ 0.68
VTA1Q9NP79 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 AC106028.4-201ENST00000614509 607 ntBASIC19.33■□□□□ 0.68
VTA1Q9NP79 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
VTA1Q9NP79 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
VTA1Q9NP79 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTA1Q9NP79 LYSMD4-203ENST00000378904 2122 ntBASIC19.33■□□□□ 0.68
VTA1Q9NP79 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTA1Q9NP79 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTA1Q9NP79 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms