Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AL137060.1-201ENST00000618151 2648 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC104109.2-201ENST00000602919 1418 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 B3GALT5-AS1-201ENST00000329618 1357 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 PDZK1P1-202ENST00000425209 1350 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 MTND4P14-201ENST00000435799 1354 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 VN1R2-201ENST00000341702 1311 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 C11orf96-202ENST00000528572 1834 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC092053.2-201ENST00000640557 1818 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 KRT18P60-201ENST00000312876 1297 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AGR2-201ENST00000401412 782 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 NUS1P3-201ENST00000423502 862 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 GPN3P1-201ENST00000423883 535 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 CLNS1AP1-201ENST00000435954 682 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 CASP3P1-201ENST00000446037 609 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC079841.1-201ENST00000481228 950 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC091874.2-201ENST00000505889 720 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 C5orf64-AS1-201ENST00000506550 1265 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 SUMO2P5-201ENST00000506790 245 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC138938.1-201ENST00000515431 782 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 RNU6-327P-201ENST00000516270 127 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC009303.2-209ENST00000588733 853 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AL022154.1-201ENST00000604698 785 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC017083.2-201ENST00000608069 979 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 AC087742.1-201ENST00000575880 1738 ntBASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-3Q9BYR6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 RNU6-839P-201ENST00000363347 108 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 RARRES2P2-201ENST00000394842 485 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 LEUTX-201ENST00000396841 671 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC02028-201ENST00000420947 528 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 RPL6P2-201ENST00000425480 783 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC010731.1-201ENST00000426087 846 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 OR52S1P-201ENST00000427016 937 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 USP9YP35-201ENST00000435696 412 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC002542.1-201ENST00000440683 193 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 OR10R1P-201ENST00000441524 1141 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AK3-203ENST00000447596 705 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 TPT1P11-201ENST00000458482 498 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC023424.2-201ENST00000493479 777 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms