Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 SIGLEC16-201ENST00000599858 1437 ntBASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.56□□□□□ -0.08
SSBP3Q9BWW4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AC139713.2-201ENST00000641328 2723 ntBASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AL590627.1-203ENST00000421194 1026 ntBASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 RPS2P1-201ENST00000434010 821 ntBASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AC002558.1-201ENST00000488906 803 ntBASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AC120114.3-201ENST00000611923 658 ntBASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AC073592.4-201ENST00000623827 446 ntBASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 FAM215A-202ENST00000632077 792 ntBASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.55□□□□□ -0.08
SSBP3Q9BWW4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 AL022342.1-201ENST00000400363 863 ntBASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 STK19B-204ENST00000512515 211 ntBASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RNA5SP419-201ENST00000515908 135 ntBASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 AC025062.2-201ENST00000605477 670 ntBASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 HLA-J-201ENST00000462773 1622 ntBASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms