Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 AC073621.1-201ENST00000392730 636 ntBASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 AC004832.2-201ENST00000426397 482 ntBASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 DNAJB3-201ENST00000446806 729 ntBASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 AC002558.1-201ENST00000488906 803 ntBASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 RNA5SP416-201ENST00000516838 111 ntBASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.1■□□□□ 0.97
RPAP1Q9BWH6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 AL353593.2-201ENST00000602529 1483 ntBASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 PRYP5-201ENST00000451909 266 ntBASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 AC019129.2-201ENST00000609837 1235 ntBASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 AL691403.2-201ENST00000618460 490 ntBASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 LINC01451-201ENST00000623792 534 ntBASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 PGM5P2-202ENST00000637225 1043 ntBASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP1Q9BWH6 AC012313.1-201ENST00000593393 3059 ntBASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP1Q9BWH6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 AC055717.3-201ENST00000622967 595 ntBASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPAP1Q9BWH6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 AL049757.1-201ENST00000616842 1596 ntBASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 AC099398.1-201ENST00000567919 2776 ntBASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 MIR1199-201ENST00000621445 119 ntBASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RPAP1Q9BWH6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms