Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 AC103564.2-201ENST00000432853 1299 ntBASIC15.6■□□□□ 0.09
USB1Q9BQ65 FDX1P1-201ENST00000449115 551 ntBASIC15.6■□□□□ 0.09
USB1Q9BQ65 AC122714.2-201ENST00000502787 707 ntBASIC15.6■□□□□ 0.09
USB1Q9BQ65 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.6■□□□□ 0.09
USB1Q9BQ65 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
USB1Q9BQ65 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 PHGDH-209ENST00000641074 1780 ntBASIC15.59■□□□□ 0.09
USB1Q9BQ65 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 AC132008.2-207ENST00000454517 770 ntBASIC15.59■□□□□ 0.09
USB1Q9BQ65 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 AL390728.6-201ENST00000566446 1246 ntBASIC15.59■□□□□ 0.09
USB1Q9BQ65 AC104692.2-201ENST00000603054 253 ntBASIC15.59■□□□□ 0.09
USB1Q9BQ65 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 AC132938.6-201ENST00000623828 1655 ntBASIC15.59■□□□□ 0.09
USB1Q9BQ65 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
USB1Q9BQ65 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
USB1Q9BQ65 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.58■□□□□ 0.09
USB1Q9BQ65 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.58■□□□□ 0.09
USB1Q9BQ65 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.58■□□□□ 0.09
USB1Q9BQ65 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
USB1Q9BQ65 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.58■□□□□ 0.09
USB1Q9BQ65 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
USB1Q9BQ65 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.58■□□□□ 0.09
USB1Q9BQ65 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
USB1Q9BQ65 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 RPS2P28-201ENST00000314255 741 ntBASIC15.58■□□□□ 0.08
USB1Q9BQ65 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 ABCD1P5-201ENST00000445663 754 ntBASIC15.58■□□□□ 0.08
USB1Q9BQ65 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 HMGB3P14-201ENST00000494195 599 ntBASIC15.58■□□□□ 0.08
USB1Q9BQ65 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 AL031008.1-201ENST00000619963 541 ntBASIC15.58■□□□□ 0.08
USB1Q9BQ65 AL355877.3-201ENST00000622820 899 ntBASIC15.58■□□□□ 0.08
USB1Q9BQ65 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
USB1Q9BQ65 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.58■□□□□ 0.08
USB1Q9BQ65 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms