Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.95■□□□□ 0.3
PKP4Q99569 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PKP4Q99569 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 DUSP5P1-201ENST00000441325 1139 ntBASIC16.95■□□□□ 0.3
PKP4Q99569 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 AC106795.1-205ENST00000512851 1056 ntBASIC16.95■□□□□ 0.3
PKP4Q99569 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.95■□□□□ 0.3
PKP4Q99569 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.95■□□□□ 0.3
PKP4Q99569 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PKP4Q99569 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PKP4Q99569 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP4Q99569 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PKP4Q99569 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.94■□□□□ 0.3
PKP4Q99569 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.94■□□□□ 0.3
PKP4Q99569 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 SPDYE21P-201ENST00000413323 827 ntBASIC16.94■□□□□ 0.3
PKP4Q99569 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.94■□□□□ 0.3
PKP4Q99569 UNC93B7-201ENST00000509439 705 ntBASIC16.94■□□□□ 0.3
PKP4Q99569 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PKP4Q99569 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.94■□□□□ 0.3
PKP4Q99569 IFNL4P1-201ENST00000607083 540 ntBASIC16.94■□□□□ 0.3
PKP4Q99569 AC148477.5-201ENST00000625164 1645 ntBASIC16.94■□□□□ 0.3
PKP4Q99569 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PKP4Q99569 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.94■□□□□ 0.3
PKP4Q99569 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.94■□□□□ 0.3
PKP4Q99569 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PKP4Q99569 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.94■□□□□ 0.3
PKP4Q99569 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PKP4Q99569 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 AC020916.1-201ENST00000587762 1774 ntBASIC16.93■□□□□ 0.3
PKP4Q99569 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PKP4Q99569 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 AKR1C7P-201ENST00000305623 895 ntBASIC16.93■□□□□ 0.3
PKP4Q99569 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 AL020989.1-201ENST00000422979 469 ntBASIC16.93■□□□□ 0.3
PKP4Q99569 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.93■□□□□ 0.3
PKP4Q99569 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.93■□□□□ 0.3
PKP4Q99569 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 LINC01711-201ENST00000598340 967 ntBASIC16.93■□□□□ 0.3
PKP4Q99569 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.93■□□□□ 0.3
PKP4Q99569 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.93■□□□□ 0.3
PKP4Q99569 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PKP4Q99569 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PKP4Q99569 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PKP4Q99569 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PKP4Q99569 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms