Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK5RAP1Q96SZ6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 RPS15P9-201ENST00000494093 319 ntBASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 AC008667.4-201ENST00000607370 168 ntBASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 GGTLC5P-201ENST00000617623 998 ntBASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP1Q96SZ6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 AC027601.4-201ENST00000611259 610 ntBASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP1Q96SZ6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 MIR574-201ENST00000385209 96 ntBASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 AC009947.1-201ENST00000444350 727 ntBASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 AC108751.1-201ENST00000490852 363 ntBASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 IGHV3-65-201ENST00000523210 341 ntBASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 AC016396.2-201ENST00000562575 1417 ntBASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 AC034105.1-201ENST00000563488 319 ntBASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP1Q96SZ6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms