Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AC060766.5-201ENST00000590539 871 ntBASIC16.41■□□□□ 0.22
NR1H4Q96RI1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AC092666.2-201ENST00000613287 246 ntBASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AL109923.1-201ENST00000618799 583 ntBASIC16.41■□□□□ 0.22
NR1H4Q96RI1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 MYC-209ENST00000641252 345 ntBASIC16.41■□□□□ 0.22
NR1H4Q96RI1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 AC099343.3-201ENST00000605834 2503 ntBASIC16.41■□□□□ 0.22
NR1H4Q96RI1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 AC092364.2-201ENST00000596710 2692 ntBASIC16.4■□□□□ 0.22
NR1H4Q96RI1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 SOX15-203ENST00000570788 1093 ntBASIC16.4■□□□□ 0.22
NR1H4Q96RI1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 AC120498.8-201ENST00000614275 531 ntBASIC16.4■□□□□ 0.22
NR1H4Q96RI1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms