Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
TRIM47Q96LD4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 AC006504.4-201ENST00000592118 1568 ntBASIC20.34■□□□□ 0.85
TRIM47Q96LD4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 MIR4751-201ENST00000578027 74 ntBASIC20.34■□□□□ 0.85
TRIM47Q96LD4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 AC004706.3-202ENST00000621574 984 ntBASIC20.34■□□□□ 0.85
TRIM47Q96LD4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 AC067852.2-201ENST00000590513 2313 ntBASIC20.34■□□□□ 0.85
TRIM47Q96LD4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 AC008764.6-201ENST00000595909 2069 ntBASIC20.34■□□□□ 0.85
TRIM47Q96LD4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM47Q96LD4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 AC093028.1-201ENST00000622998 982 ntBASIC20.33■□□□□ 0.85
TRIM47Q96LD4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM47Q96LD4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM47Q96LD4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 AL031432.2-201ENST00000566714 459 ntBASIC20.32■□□□□ 0.84
TRIM47Q96LD4 AL928711.1-201ENST00000570165 459 ntBASIC20.32■□□□□ 0.84
TRIM47Q96LD4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 GMCL1P1-201ENST00000463439 1581 ntBASIC20.32■□□□□ 0.84
TRIM47Q96LD4 AC010460.3-201ENST00000511359 1579 ntBASIC20.32■□□□□ 0.84
TRIM47Q96LD4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM47Q96LD4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 COX20P2-201ENST00000452636 358 ntBASIC20.31■□□□□ 0.84
TRIM47Q96LD4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms