Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 NOC2LP2-201ENST00000407594 1944 ntBASIC18.74■□□□□ 0.59
SNX27Q96L92 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SNX27Q96L92 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SNX27Q96L92 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 KRT18P28-201ENST00000453838 1332 ntBASIC18.74■□□□□ 0.59
SNX27Q96L92 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 GNAS-203ENST00000306120 1878 ntBASIC18.73■□□□□ 0.59
SNX27Q96L92 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX27Q96L92 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SNX27Q96L92 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SNX27Q96L92 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX27Q96L92 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 PTCHD3P3-201ENST00000403073 906 ntBASIC18.73■□□□□ 0.59
SNX27Q96L92 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 MED15P5-201ENST00000423150 992 ntBASIC18.73■□□□□ 0.59
SNX27Q96L92 AC108073.2-201ENST00000464002 357 ntBASIC18.73■□□□□ 0.59
SNX27Q96L92 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX27Q96L92 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.73■□□□□ 0.59
SNX27Q96L92 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SNX27Q96L92 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNX27Q96L92 AL590787.1-201ENST00000568856 1315 ntBASIC18.73■□□□□ 0.59
SNX27Q96L92 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX27Q96L92 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX27Q96L92 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.72■□□□□ 0.59
SNX27Q96L92 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.72■□□□□ 0.59
SNX27Q96L92 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.72■□□□□ 0.59
SNX27Q96L92 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.72■□□□□ 0.59
SNX27Q96L92 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
SNX27Q96L92 FAM197Y3-203ENST00000618346 717 ntBASIC18.72■□□□□ 0.59
SNX27Q96L92 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX27Q96L92 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX27Q96L92 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX27Q96L92 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX27Q96L92 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SNX27Q96L92 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX27Q96L92 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX27Q96L92 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX27Q96L92 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SNX27Q96L92 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX27Q96L92 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX27Q96L92 AP002414.1-201ENST00000391405 1147 ntBASIC18.71■□□□□ 0.59
SNX27Q96L92 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.71■□□□□ 0.59
SNX27Q96L92 AL591424.1-201ENST00000442569 1213 ntBASIC18.71■□□□□ 0.59
SNX27Q96L92 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.71■□□□□ 0.59
SNX27Q96L92 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
SNX27Q96L92 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.71■□□□□ 0.59
SNX27Q96L92 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX27Q96L92 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNX27Q96L92 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms