Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.29■□□□□ 0.52
SMARCD1Q96GM5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 AP000347.1-202ENST00000435868 847 ntBASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 RPL13AP23-201ENST00000480739 586 ntBASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 AC145285.3-201ENST00000564603 959 ntBASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 AL805961.1-202ENST00000641562 540 ntBASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCD1Q96GM5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 RNA5SP415-201ENST00000517246 115 ntBASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCD1Q96GM5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.27■□□□□ 0.51
SMARCD1Q96GM5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMARCD1Q96GM5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.27■□□□□ 0.51
SMARCD1Q96GM5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMARCD1Q96GM5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 RPS15P9-201ENST00000494093 319 ntBASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 Z83851.2-201ENST00000609564 659 ntBASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 AF228730.7-201ENST00000641842 219 ntBASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SMARCD1Q96GM5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms