Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
BRF1Q92994 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.49■□□□□ 0.87
BRF1Q92994 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
BRF1Q92994 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 FOSL1P1-201ENST00000511041 816 ntBASIC20.49■□□□□ 0.87
BRF1Q92994 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.49■□□□□ 0.87
BRF1Q92994 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.49■□□□□ 0.87
BRF1Q92994 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.49■□□□□ 0.87
BRF1Q92994 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.49■□□□□ 0.87
BRF1Q92994 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.49■□□□□ 0.87
BRF1Q92994 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRF1Q92994 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
BRF1Q92994 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.48■□□□□ 0.87
BRF1Q92994 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 AC093525.9-201ENST00000624961 1746 ntBASIC20.48■□□□□ 0.87
BRF1Q92994 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.48■□□□□ 0.87
BRF1Q92994 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.48■□□□□ 0.87
BRF1Q92994 AC003669.1-201ENST00000334569 611 ntBASIC20.48■□□□□ 0.87
BRF1Q92994 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
BRF1Q92994 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.48■□□□□ 0.87
BRF1Q92994 KLF4P1-201ENST00000412782 1185 ntBASIC20.48■□□□□ 0.87
BRF1Q92994 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.48■□□□□ 0.87
BRF1Q92994 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.48■□□□□ 0.87
BRF1Q92994 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.48■□□□□ 0.87
BRF1Q92994 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.48■□□□□ 0.87
BRF1Q92994 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.48■□□□□ 0.87
BRF1Q92994 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
BRF1Q92994 AP000867.4-201ENST00000641616 219 ntBASIC20.48■□□□□ 0.87
BRF1Q92994 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.48■□□□□ 0.87
BRF1Q92994 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
BRF1Q92994 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.48■□□□□ 0.87
BRF1Q92994 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRF1Q92994 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.47■□□□□ 0.87
BRF1Q92994 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 AD000864.1-201ENST00000624076 2295 ntBASIC20.47■□□□□ 0.87
BRF1Q92994 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.47■□□□□ 0.87
BRF1Q92994 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.47■□□□□ 0.87
BRF1Q92994 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
BRF1Q92994 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.47■□□□□ 0.87
BRF1Q92994 AL135999.2-201ENST00000622438 1686 ntBASIC20.47■□□□□ 0.87
BRF1Q92994 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
BRF1Q92994 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
BRF1Q92994 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
BRF1Q92994 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.47■□□□□ 0.87
BRF1Q92994 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.47■□□□□ 0.87
BRF1Q92994 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRF1Q92994 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.46■□□□□ 0.87
BRF1Q92994 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
BRF1Q92994 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 AC148477.5-201ENST00000625164 1645 ntBASIC20.46■□□□□ 0.87
BRF1Q92994 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.46■□□□□ 0.87
BRF1Q92994 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BRF1Q92994 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.46■□□□□ 0.87
BRF1Q92994 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRF1Q92994 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.46■□□□□ 0.87
BRF1Q92994 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.46■□□□□ 0.87
BRF1Q92994 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.46■□□□□ 0.87
BRF1Q92994 AL591684.3-201ENST00000605187 298 ntBASIC20.46■□□□□ 0.87
BRF1Q92994 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms