Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SHKBP1Q8TBC3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.26■□□□□ 0.51
SHKBP1Q8TBC3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 CRYGEP-201ENST00000412192 528 ntBASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 RPS8P6-201ENST00000426177 609 ntBASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 IGHV3-52-201ENST00000519770 353 ntBASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 MIR4751-201ENST00000578027 74 ntBASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 AP001160.2-201ENST00000596071 487 ntBASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 AC008667.4-201ENST00000607370 168 ntBASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHKBP1Q8TBC3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 VN2R19P-201ENST00000442399 1052 ntBASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 AC004967.1-201ENST00000453589 447 ntBASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 MTDHP5-201ENST00000598980 586 ntBASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 LINC00896-202ENST00000609602 2128 ntBASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 AC134684.3-201ENST00000641758 218 ntBASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SHKBP1Q8TBC3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.23■□□□□ 0.51
SHKBP1Q8TBC3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms