Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 AC113404.2-201ENST00000507884 177 ntBASIC5.4□□□□□ -1.55
SYNE1Q8NF91 CYGB-205ENST00000590175 830 ntTSL 3 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE1Q8NF91 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC018845.2-201ENST00000568326 409 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PMPCAP1-201ENST00000508114 1576 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 URGCP-206ENST00000446958 365 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC131212.3-201ENST00000624087 4219 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 IMP4-203ENST00000409935 958 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 CTNS-203ENST00000399306 803 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 KRT18P2-201ENST00000447938 1258 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SIGLEC16-201ENST00000599858 1437 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms