Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM35BQ8NCS4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM35BQ8NCS4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM35BQ8NCS4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 AL135999.2-201ENST00000622438 1686 ntBASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 AL121772.3-201ENST00000610840 674 ntBASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 AC093525.9-201ENST00000624961 1746 ntBASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM35BQ8NCS4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms