Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 AL671883.3-201ENST00000603274 991 ntBASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 AL022342.1-201ENST00000400363 863 ntBASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 RNA5SP415-201ENST00000517246 115 ntBASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 UNC93B6-202ENST00000528242 690 ntBASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 TERC-201ENST00000602385 541 ntBASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARHGEF39Q8N4T4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 AC009947.1-201ENST00000444350 727 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 RPL13AP23-201ENST00000480739 586 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 RPS15P9-201ENST00000494093 319 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 IGHV3-65-201ENST00000523210 341 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 AC034105.1-201ENST00000563488 319 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 AC106730.1-201ENST00000566722 1090 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 AC008667.4-201ENST00000607370 168 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 PGM5P2-202ENST00000637225 1043 ntBASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF39Q8N4T4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms