Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 AC100803.2-201ENST00000562459 1963 ntBASIC18■□□□□ 0.47
PHTF2Q8N3S3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHTF2Q8N3S3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18■□□□□ 0.47
PHTF2Q8N3S3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 AC148477.5-201ENST00000625164 1645 ntBASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 AC012317.2-201ENST00000623305 2251 ntBASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 KRT18P3-201ENST00000451602 1288 ntBASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 AC006557.2-201ENST00000592985 1240 ntBASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 AL139424.1-201ENST00000607572 797 ntBASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PHTF2Q8N3S3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 MIR1233-2-201ENST00000408138 82 ntBASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 MIR1233-1-201ENST00000408722 82 ntBASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 AL020989.1-201ENST00000422979 469 ntBASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.98■□□□□ 0.47
PHTF2Q8N3S3 AL589182.2-201ENST00000619332 1049 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms