Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 AC145285.3-201ENST00000564603 959 ntBASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 AL355312.1-201ENST00000407115 2176 ntBASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 TERC-201ENST00000602385 541 ntBASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 AC046185.3-201ENST00000623228 1824 ntBASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SCN4BQ8IWT1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 LINC00304-203ENST00000565008 1864 ntBASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 LINC00982-205ENST00000420957 435 ntBASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 AC034105.1-201ENST00000563488 319 ntBASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 AL139424.1-201ENST00000607572 797 ntBASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 AL139327.4-201ENST00000612362 153 ntBASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 PGM5P2-202ENST00000637225 1043 ntBASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SCN4BQ8IWT1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms