Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 GPR32P1-201ENST00000601788 811 ntBASIC16.35■□□□□ 0.21
CCDC71Q8IV32 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC71Q8IV32 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 AC008894.3-201ENST00000624324 3103 ntBASIC16.34■□□□□ 0.21
CCDC71Q8IV32 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 AC099336.1-202ENST00000602961 463 ntBASIC16.34■□□□□ 0.21
CCDC71Q8IV32 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 AC233702.3-201ENST00000578656 1387 ntBASIC16.34■□□□□ 0.21
CCDC71Q8IV32 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71Q8IV32 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCDC71Q8IV32 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC71Q8IV32 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC71Q8IV32 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC71Q8IV32 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC71Q8IV32 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCDC71Q8IV32 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 IGHGP-201ENST00000390555 1178 ntBASIC16.33■□□□□ 0.2
CCDC71Q8IV32 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 MIR3180-4-201ENST00000582223 153 ntBASIC16.33■□□□□ 0.2
CCDC71Q8IV32 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 AC104692.2-201ENST00000603054 253 ntBASIC16.33■□□□□ 0.2
CCDC71Q8IV32 AC024563.2-201ENST00000603282 481 ntBASIC16.33■□□□□ 0.2
CCDC71Q8IV32 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.33■□□□□ 0.2
CCDC71Q8IV32 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 AC124864.1-201ENST00000623408 392 ntBASIC16.33■□□□□ 0.2
CCDC71Q8IV32 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 REXO1L11P-201ENST00000620964 1927 ntBASIC16.33■□□□□ 0.2
CCDC71Q8IV32 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms