Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 HILS1-202ENST00000545329 423 ntBASIC21.62■■□□□ 1.05
COL23A1Q86Y22 AC010336.2-201ENST00000564226 506 ntBASIC21.62■■□□□ 1.05
COL23A1Q86Y22 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.62■■□□□ 1.05
COL23A1Q86Y22 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 AC008267.7-201ENST00000624570 1194 ntBASIC21.61■■□□□ 1.05
COL23A1Q86Y22 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL23A1Q86Y22 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 AC109635.5-201ENST00000533593 962 ntBASIC21.6■■□□□ 1.05
COL23A1Q86Y22 AC027307.2-201ENST00000591252 911 ntBASIC21.6■■□□□ 1.05
COL23A1Q86Y22 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.6■■□□□ 1.05
COL23A1Q86Y22 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 WASH6P-202ENST00000359512 1437 ntBASIC21.59■■□□□ 1.05
COL23A1Q86Y22 GPR53P-205ENST00000457298 1084 ntBASIC21.59■■□□□ 1.05
COL23A1Q86Y22 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL23A1Q86Y22 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
COL23A1Q86Y22 TP53TG3HP-202ENST00000569755 579 ntBASIC21.58■■□□□ 1.05
COL23A1Q86Y22 AL020996.1-203ENST00000536896 2307 ntBASIC21.58■■□□□ 1.04
COL23A1Q86Y22 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL23A1Q86Y22 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms