Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 SPDYE15P-201ENST00000424157 909 ntBASIC15.53■□□□□ 0.08
LRRC28Q86X40 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 MIR3917-201ENST00000580971 93 ntBASIC15.53■□□□□ 0.08
LRRC28Q86X40 MIR3180-4-201ENST00000582223 153 ntBASIC15.53■□□□□ 0.08
LRRC28Q86X40 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 HYMAI.1-201ENST00000620949 238 ntBASIC15.53■□□□□ 0.08
LRRC28Q86X40 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 LINC01451-201ENST00000623792 534 ntBASIC15.53■□□□□ 0.08
LRRC28Q86X40 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC28Q86X40 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC28Q86X40 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
LRRC28Q86X40 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.52■□□□□ 0.08
LRRC28Q86X40 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC28Q86X40 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
LRRC28Q86X40 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC28Q86X40 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC28Q86X40 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC28Q86X40 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.52■□□□□ 0.07
LRRC28Q86X40 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRC28Q86X40 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC28Q86X40 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.52■□□□□ 0.07
LRRC28Q86X40 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
LRRC28Q86X40 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LRRC28Q86X40 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC28Q86X40 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LRRC28Q86X40 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC28Q86X40 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
LRRC28Q86X40 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC28Q86X40 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRC28Q86X40 LINC01311-201ENST00000565162 1445 ntBASIC15.51■□□□□ 0.07
LRRC28Q86X40 AC060834.1-201ENST00000443027 2032 ntBASIC15.51■□□□□ 0.07
LRRC28Q86X40 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC28Q86X40 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC28Q86X40 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC28Q86X40 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC28Q86X40 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC28Q86X40 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC28Q86X40 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC28Q86X40 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
LRRC28Q86X40 PCDHA1-201ENST00000378133 2726 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms