Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL135999.2-201ENST00000622438 1686 ntBASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 AC012640.2-201ENST00000561606 901 ntBASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 MIR1199-201ENST00000621445 119 ntBASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 AC004706.3-202ENST00000621574 984 ntBASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRTM4Q86VH4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 AC243591.1-201ENST00000452967 1364 ntBASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 LETM1P2-201ENST00000597330 2178 ntBASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 LINC00982-205ENST00000420957 435 ntBASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 AL590627.1-203ENST00000421194 1026 ntBASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 ACTG1P4-201ENST00000425123 1122 ntBASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 AC116407.3-201ENST00000623905 1129 ntBASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRTM4Q86VH4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 AC067852.2-201ENST00000590513 2313 ntBASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 KRT18P27-201ENST00000427733 1299 ntBASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 AC092910.1-201ENST00000482027 1129 ntBASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 AL139424.1-201ENST00000607572 797 ntBASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 AC120114.3-201ENST00000611923 658 ntBASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 BX640515.1-201ENST00000617215 977 ntBASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM4Q86VH4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 IL9RP2-201ENST00000423948 1312 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms