Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 AC004870.1-201ENST00000315132 882 ntBASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 NUS1P2-201ENST00000417358 873 ntBASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 KRT16P4-201ENST00000453883 522 ntBASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 AC068587.6-202ENST00000641839 5619 ntBASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP1BQ7LBR1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 AC112698.1-201ENST00000510299 916 ntBASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 AC096582.2-201ENST00000510860 516 ntBASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP1BQ7LBR1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 TSPY19P-201ENST00000418461 509 ntBASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 IGHV3-47-201ENST00000425060 335 ntBASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 TSPY18P-201ENST00000441642 509 ntBASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 KRT18P31-201ENST00000506277 1292 ntBASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 AC009533.2-201ENST00000543664 586 ntBASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP1BQ7LBR1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms