Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST2H3AQ71DI3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 KRT17P6-201ENST00000453795 1220 ntBASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TOB2P1-201ENST00000469761 992 ntBASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 AC111152.3-201ENST00000569699 673 ntBASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TP73-AS1-210ENST00000637775 1455 ntBASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.31■□□□□ 0.04
HIST2H3AQ71DI3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 NSUN5P1-202ENST00000421140 1535 ntBASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 NSUN5P2-203ENST00000457352 1529 ntBASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 BNIP3P18-201ENST00000593976 575 ntBASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AL445228.2-201ENST00000605589 952 ntBASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AC091076.1-201ENST00000610741 619 ntBASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms