Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 AC024909.3-201ENST00000611513 2257 ntBASIC13.19□□□□□ -0.3
MRPL54Q6P161 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL54Q6P161 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
MRPL54Q6P161 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 AC022898.2-201ENST00000616822 1312 ntBASIC13.18□□□□□ -0.3
MRPL54Q6P161 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 AC078925.2-201ENST00000624013 1973 ntBASIC13.18□□□□□ -0.3
MRPL54Q6P161 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 AL023284.2-201ENST00000405850 579 ntBASIC13.18□□□□□ -0.3
MRPL54Q6P161 AC091874.3-201ENST00000512672 1195 ntBASIC13.18□□□□□ -0.3
MRPL54Q6P161 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 AC008622.2-201ENST00000617006 1229 ntBASIC13.18□□□□□ -0.3
MRPL54Q6P161 AC131212.4-201ENST00000623606 975 ntBASIC13.18□□□□□ -0.3
MRPL54Q6P161 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.18□□□□□ -0.3
MRPL54Q6P161 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL54Q6P161 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MRPL54Q6P161 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.17□□□□□ -0.3
MRPL54Q6P161 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL54Q6P161 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL54Q6P161 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL54Q6P161 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
MRPL54Q6P161 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL54Q6P161 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL54Q6P161 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL54Q6P161 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.17□□□□□ -0.3
MRPL54Q6P161 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL54Q6P161 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms