Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 AL031432.2-201ENST00000566714 459 ntBASIC18.12■□□□□ 0.49
TPGS2Q68CL5 AL928711.1-201ENST00000570165 459 ntBASIC18.12■□□□□ 0.49
TPGS2Q68CL5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 AC068137.2-201ENST00000605408 478 ntBASIC18.12■□□□□ 0.49
TPGS2Q68CL5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.12■□□□□ 0.49
TPGS2Q68CL5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 AC020763.4-201ENST00000623414 4170 ntBASIC18.11■□□□□ 0.49
TPGS2Q68CL5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 AC091812.2-201ENST00000619081 385 ntBASIC18.11■□□□□ 0.49
TPGS2Q68CL5 KRT18P28-201ENST00000453838 1332 ntBASIC18.11■□□□□ 0.49
TPGS2Q68CL5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
TPGS2Q68CL5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 HCG11-201ENST00000411553 5696 ntBASIC18.1■□□□□ 0.49
TPGS2Q68CL5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 AC012317.2-201ENST00000623305 2251 ntBASIC18.1■□□□□ 0.49
TPGS2Q68CL5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.1■□□□□ 0.49
TPGS2Q68CL5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.09■□□□□ 0.49
TPGS2Q68CL5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPGS2Q68CL5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TPGS2Q68CL5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms