Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 MRPS18AP1-201ENST00000414458 589 ntBASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 AC026150.2-201ENST00000564693 1156 ntBASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 RN7SL204P-201ENST00000582831 262 ntBASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 VMA21-202ENST00000370361 693 ntTSL 5 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 SLC25A39P2-201ENST00000537614 270 ntBASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 POLD4-211ENST00000539074 714 ntTSL 3 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 LINC01225-203ENST00000563550 1244 ntBASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPAQ5VT25 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 AC092474.2-201ENST00000424288 719 ntBASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 FAM207CP-201ENST00000443486 507 ntBASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC26.01■■□□□ 1.75
CDC42BPAQ5VT25 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 MTRF1LP2-201ENST00000506027 1122 ntBASIC26■■□□□ 1.75
CDC42BPAQ5VT25 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 NARF-206ENST00000457415 1668 ntTSL 5 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 AL353732.1-201ENST00000569618 1459 ntBASIC26■■□□□ 1.75
CDC42BPAQ5VT25 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPAQ5VT25 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 BICD1-207ENST00000551848 1962 ntBASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 AC069120.2-201ENST00000524091 540 ntBASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 EGFEM1P-202ENST00000431685 1563 ntBASIC25.99■■□□□ 1.75
CDC42BPAQ5VT25 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 HCG4-201ENST00000418983 998 ntBASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 AC012569.1-201ENST00000591191 1524 ntBASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms