Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC134684.3-201ENST00000641758 218 ntBASIC20.74■□□□□ 0.91
PDS5AQ29RF7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 EGFEM1P-202ENST00000431685 1563 ntBASIC20.74■□□□□ 0.91
PDS5AQ29RF7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 GNAS-203ENST00000306120 1878 ntBASIC20.73■□□□□ 0.91
PDS5AQ29RF7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 HTR5BP-201ENST00000430851 1154 ntBASIC20.73■□□□□ 0.91
PDS5AQ29RF7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 AC074386.1-202ENST00000463561 864 ntBASIC20.73■□□□□ 0.91
PDS5AQ29RF7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PDS5AQ29RF7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDS5AQ29RF7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 AC211486.1-202ENST00000416371 468 ntBASIC20.71■□□□□ 0.91
PDS5AQ29RF7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 AC211476.1-201ENST00000503899 468 ntBASIC20.71■□□□□ 0.91
PDS5AQ29RF7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 AC079781.4-201ENST00000641908 219 ntBASIC20.71■□□□□ 0.91
PDS5AQ29RF7 ELL2P1-201ENST00000413990 1906 ntBASIC20.71■□□□□ 0.91
PDS5AQ29RF7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 AC116353.5-201ENST00000638148 1699 ntBASIC20.71■□□□□ 0.91
PDS5AQ29RF7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.71■□□□□ 0.91
PDS5AQ29RF7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms