Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 INTS4P1-201ENST00000438455 1935 ntBASIC18.57■□□□□ 0.56
CDR2Q01850 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.57■□□□□ 0.56
CDR2Q01850 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.57■□□□□ 0.56
CDR2Q01850 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.57■□□□□ 0.56
CDR2Q01850 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.57■□□□□ 0.56
CDR2Q01850 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CDR2Q01850 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CDR2Q01850 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.57■□□□□ 0.56
CDR2Q01850 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.57■□□□□ 0.56
CDR2Q01850 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CDR2Q01850 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.57■□□□□ 0.56
CDR2Q01850 AC091076.1-201ENST00000610741 619 ntBASIC18.57■□□□□ 0.56
CDR2Q01850 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.57■□□□□ 0.56
CDR2Q01850 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDR2Q01850 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDR2Q01850 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.57■□□□□ 0.56
CDR2Q01850 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 AD000864.1-201ENST00000624076 2295 ntBASIC18.57■□□□□ 0.56
CDR2Q01850 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.57■□□□□ 0.56
CDR2Q01850 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.57■□□□□ 0.56
CDR2Q01850 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.57■□□□□ 0.56
CDR2Q01850 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDR2Q01850 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDR2Q01850 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDR2Q01850 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDR2Q01850 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.56■□□□□ 0.56
CDR2Q01850 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.56■□□□□ 0.56
CDR2Q01850 AC132938.5-201ENST00000624980 1813 ntBASIC18.56■□□□□ 0.56
CDR2Q01850 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CDR2Q01850 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CDR2Q01850 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CDR2Q01850 AC096582.2-201ENST00000510860 516 ntBASIC18.56■□□□□ 0.56
CDR2Q01850 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.56■□□□□ 0.56
CDR2Q01850 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.56■□□□□ 0.56
CDR2Q01850 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.56■□□□□ 0.56
CDR2Q01850 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.56■□□□□ 0.56
CDR2Q01850 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.56■□□□□ 0.56
CDR2Q01850 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDR2Q01850 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 AC009336.1-201ENST00000608941 1553 ntBASIC18.55■□□□□ 0.56
CDR2Q01850 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.55■□□□□ 0.56
CDR2Q01850 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.55■□□□□ 0.56
CDR2Q01850 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CDR2Q01850 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.55■□□□□ 0.56
CDR2Q01850 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CDR2Q01850 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.55■□□□□ 0.56
CDR2Q01850 ARMC10P1-201ENST00000313754 855 ntBASIC18.55■□□□□ 0.56
CDR2Q01850 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 RCN1P2-201ENST00000398357 915 ntBASIC18.55■□□□□ 0.56
CDR2Q01850 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 ATP5G2P1-201ENST00000433580 426 ntBASIC18.55■□□□□ 0.56
CDR2Q01850 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.55■□□□□ 0.56
CDR2Q01850 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.55■□□□□ 0.56
CDR2Q01850 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.55■□□□□ 0.56
CDR2Q01850 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.55■□□□□ 0.56
CDR2Q01850 AC074051.2-201ENST00000565115 352 ntBASIC18.55■□□□□ 0.56
CDR2Q01850 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CDR2Q01850 AC010331.1-201ENST00000611423 582 ntBASIC18.55■□□□□ 0.56
CDR2Q01850 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDR2Q01850 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDR2Q01850 LINC02012-201ENST00000608206 1725 ntBASIC18.54■□□□□ 0.56
CDR2Q01850 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDR2Q01850 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDR2Q01850 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDR2Q01850 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDR2Q01850 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms