Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H3AP68431 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 AC092119.3-201ENST00000612618 583 ntBASIC15.22■□□□□ 0.03
HIST1H3AP68431 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 AC073592.5-201ENST00000624854 528 ntBASIC15.22■□□□□ 0.03
HIST1H3AP68431 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 LINC02012-201ENST00000608206 1725 ntBASIC15.22■□□□□ 0.03
HIST1H3AP68431 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H3AP68431 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H3AP68431 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H3AP68431 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
HIST1H3AP68431 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H3AP68431 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
HIST1H3AP68431 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
HIST1H3AP68431 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
HIST1H3AP68431 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 AL135999.2-201ENST00000622438 1686 ntBASIC15.2■□□□□ 0.02
HIST1H3AP68431 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 KLF4P1-201ENST00000412782 1185 ntBASIC15.2■□□□□ 0.02
HIST1H3AP68431 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms