Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CDH4P55283 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDH4P55283 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CDH4P55283 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 IL9RP2-201ENST00000423948 1312 ntBASIC17.77■□□□□ 0.44
CDH4P55283 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 AP002414.3-201ENST00000589352 1468 ntBASIC17.77■□□□□ 0.44
CDH4P55283 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH4P55283 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH4P55283 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.77■□□□□ 0.44
CDH4P55283 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CDH4P55283 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH4P55283 AC006504.4-201ENST00000592118 1568 ntBASIC17.77■□□□□ 0.44
CDH4P55283 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH4P55283 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH4P55283 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH4P55283 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDH4P55283 GPR89P-201ENST00000407924 1495 ntBASIC17.76■□□□□ 0.43
CDH4P55283 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CDH4P55283 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH4P55283 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CDH4P55283 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH4P55283 ELK2BP-201ENST00000415014 1224 ntBASIC17.76■□□□□ 0.43
CDH4P55283 AC098831.1-202ENST00000438821 336 ntBASIC17.76■□□□□ 0.43
CDH4P55283 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH4P55283 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH4P55283 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH4P55283 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH4P55283 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH4P55283 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH4P55283 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH4P55283 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH4P55283 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH4P55283 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH4P55283 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH4P55283 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH4P55283 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 IGHV3-22-201ENST00000520721 359 ntBASIC17.75■□□□□ 0.43
CDH4P55283 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH4P55283 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH4P55283 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH4P55283 AC120114.3-201ENST00000611923 658 ntBASIC17.75■□□□□ 0.43
CDH4P55283 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH4P55283 AC005593.1-201ENST00000624894 515 ntBASIC17.75■□□□□ 0.43
CDH4P55283 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH4P55283 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
CDH4P55283 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH4P55283 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDH4P55283 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH4P55283 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms