Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.15■□□□□ 0.66
PMS1P54277 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.15■□□□□ 0.66
PMS1P54277 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.15■□□□□ 0.66
PMS1P54277 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.15■□□□□ 0.66
PMS1P54277 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PMS1P54277 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PMS1P54277 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.15■□□□□ 0.66
PMS1P54277 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.15■□□□□ 0.66
PMS1P54277 AL358472.4-201ENST00000633140 710 ntBASIC19.15■□□□□ 0.66
PMS1P54277 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 INTS4P1-201ENST00000438455 1935 ntBASIC19.15■□□□□ 0.66
PMS1P54277 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.15■□□□□ 0.66
PMS1P54277 AC092068.3-201ENST00000587894 2016 ntBASIC19.15■□□□□ 0.66
PMS1P54277 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.15■□□□□ 0.66
PMS1P54277 HTR7P1-202ENST00000624664 4411 ntBASIC19.15■□□□□ 0.66
PMS1P54277 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 NSUN5P1-202ENST00000421140 1535 ntBASIC19.15■□□□□ 0.66
PMS1P54277 NSUN5P2-203ENST00000457352 1529 ntBASIC19.15■□□□□ 0.66
PMS1P54277 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PMS1P54277 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PMS1P54277 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PMS1P54277 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PMS1P54277 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.14■□□□□ 0.65
PMS1P54277 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PMS1P54277 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.14■□□□□ 0.65
PMS1P54277 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
PMS1P54277 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 RCN1P2-201ENST00000398357 915 ntBASIC19.14■□□□□ 0.65
PMS1P54277 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 KRT17P6-201ENST00000453795 1220 ntBASIC19.14■□□□□ 0.65
PMS1P54277 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.14■□□□□ 0.65
PMS1P54277 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 AC111152.3-201ENST00000569699 673 ntBASIC19.14■□□□□ 0.65
PMS1P54277 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PMS1P54277 NPAP1P7-201ENST00000613027 823 ntBASIC19.14■□□□□ 0.65
PMS1P54277 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.14■□□□□ 0.65
PMS1P54277 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PMS1P54277 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 RNF216P1-203ENST00000404404 2427 ntBASIC19.14■□□□□ 0.65
PMS1P54277 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 AC009336.1-201ENST00000608941 1553 ntBASIC19.14■□□□□ 0.65
PMS1P54277 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PMS1P54277 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PMS1P54277 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.14■□□□□ 0.65
PMS1P54277 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PMS1P54277 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.13■□□□□ 0.65
PMS1P54277 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PMS1P54277 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.13■□□□□ 0.65
PMS1P54277 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PMS1P54277 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PMS1P54277 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 LINC00265-3P-201ENST00000447588 903 ntBASIC19.13■□□□□ 0.65
PMS1P54277 VENTXP7-201ENST00000475503 772 ntBASIC19.13■□□□□ 0.65
PMS1P54277 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.13■□□□□ 0.65
PMS1P54277 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 KRT18P35-201ENST00000510488 1269 ntBASIC19.13■□□□□ 0.65
PMS1P54277 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.13■□□□□ 0.65
PMS1P54277 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PMS1P54277 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PMS1P54277 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.13■□□□□ 0.65
PMS1P54277 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.13■□□□□ 0.65
PMS1P54277 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.13■□□□□ 0.65
PMS1P54277 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PMS1P54277 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PMS1P54277 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms