Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
SMARCA2P51531 AC004233.3-201ENST00000607794 1269 ntBASIC30.49■■■□□ 2.47
SMARCA2P51531 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
SMARCA2P51531 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA2P51531 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC30.49■■■□□ 2.47
SMARCA2P51531 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
SMARCA2P51531 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA2P51531 AC135776.1-201ENST00000319817 2481 ntBASIC30.49■■■□□ 2.47
SMARCA2P51531 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA2P51531 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC30.49■■■□□ 2.47
SMARCA2P51531 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA2P51531 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
SMARCA2P51531 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC30.49■■■□□ 2.47
SMARCA2P51531 AL139327.4-201ENST00000612362 153 ntBASIC30.49■■■□□ 2.47
SMARCA2P51531 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
SMARCA2P51531 IGHV3-72-202ENST00000621503 303 ntBASIC30.49■■■□□ 2.47
SMARCA2P51531 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCA2P51531 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC30.48■■■□□ 2.47
SMARCA2P51531 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC30.48■■■□□ 2.47
SMARCA2P51531 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
SMARCA2P51531 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC30.48■■■□□ 2.47
SMARCA2P51531 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC30.48■■■□□ 2.47
SMARCA2P51531 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCA2P51531 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC30.47■■■□□ 2.47
SMARCA2P51531 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC30.47■■■□□ 2.47
SMARCA2P51531 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC30.47■■■□□ 2.47
SMARCA2P51531 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC30.47■■■□□ 2.47
SMARCA2P51531 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC30.47■■■□□ 2.47
SMARCA2P51531 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA2P51531 AL132655.2-201ENST00000596276 594 ntBASIC30.47■■■□□ 2.47
SMARCA2P51531 AL606495.2-201ENST00000605867 535 ntBASIC30.47■■■□□ 2.47
SMARCA2P51531 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA2P51531 KRT18P55-202ENST00000578578 1546 ntBASIC30.47■■■□□ 2.47
SMARCA2P51531 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
SMARCA2P51531 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC30.47■■■□□ 2.47
SMARCA2P51531 AL353732.1-201ENST00000569618 1459 ntBASIC30.47■■■□□ 2.47
SMARCA2P51531 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCA2P51531 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC30.46■■■□□ 2.47
SMARCA2P51531 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC30.46■■■□□ 2.47
SMARCA2P51531 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
SMARCA2P51531 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC30.46■■■□□ 2.47
SMARCA2P51531 AC027369.6-201ENST00000525520 931 ntBASIC30.46■■■□□ 2.47
SMARCA2P51531 AC140912.1-201ENST00000577171 1054 ntBASIC30.46■■■□□ 2.47
SMARCA2P51531 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC30.46■■■□□ 2.47
SMARCA2P51531 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC30.46■■■□□ 2.47
SMARCA2P51531 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA2P51531 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA2P51531 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA2P51531 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMARCA2P51531 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SMARCA2P51531 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC30.45■■■□□ 2.47
SMARCA2P51531 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC30.45■■■□□ 2.47
SMARCA2P51531 AC079776.1-201ENST00000401540 1152 ntBASIC30.45■■■□□ 2.47
SMARCA2P51531 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SMARCA2P51531 REEP4-207ENST00000523293 913 ntTSL 3 BASIC30.45■■■□□ 2.47
SMARCA2P51531 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC30.45■■■□□ 2.47
SMARCA2P51531 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
SMARCA2P51531 WIZP1-201ENST00000531444 2299 ntBASIC30.45■■■□□ 2.47
SMARCA2P51531 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC30.45■■■□□ 2.46
SMARCA2P51531 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SMARCA2P51531 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC30.45■■■□□ 2.46
SMARCA2P51531 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SMARCA2P51531 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.46
SMARCA2P51531 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC30.45■■■□□ 2.46
SMARCA2P51531 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC30.45■■■□□ 2.46
SMARCA2P51531 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC30.45■■■□□ 2.46
SMARCA2P51531 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SMARCA2P51531 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SMARCA2P51531 HILS1-202ENST00000545329 423 ntBASIC30.45■■■□□ 2.46
SMARCA2P51531 IFT20-216ENST00000588477 774 ntTSL 5 BASIC30.45■■■□□ 2.46
SMARCA2P51531 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC30.45■■■□□ 2.46
SMARCA2P51531 NKG7-205ENST00000600427 520 ntTSL 3 BASIC30.45■■■□□ 2.46
SMARCA2P51531 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC30.45■■■□□ 2.46
SMARCA2P51531 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
SMARCA2P51531 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC30.45■■■□□ 2.46
SMARCA2P51531 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA2P51531 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA2P51531 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA2P51531 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA2P51531 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA2P51531 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA2P51531 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
SMARCA2P51531 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA2P51531 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA2P51531 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms