Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6CP51160 KRT8P10-201ENST00000450021 1447 ntBASIC18.83■□□□□ 0.61
PDE6CP51160 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6CP51160 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6CP51160 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.83■□□□□ 0.61
PDE6CP51160 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
PDE6CP51160 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.83■□□□□ 0.61
PDE6CP51160 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6CP51160 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6CP51160 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6CP51160 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PDE6CP51160 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6CP51160 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PDE6CP51160 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6CP51160 COX5BP2-201ENST00000392354 334 ntBASIC18.83■□□□□ 0.6
PDE6CP51160 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE6CP51160 AC007967.3-201ENST00000434308 558 ntBASIC18.83■□□□□ 0.6
PDE6CP51160 AC002558.1-201ENST00000488906 803 ntBASIC18.83■□□□□ 0.6
PDE6CP51160 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE6CP51160 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PDE6CP51160 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE6CP51160 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE6CP51160 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE6CP51160 AC114341.1-201ENST00000618070 349 ntBASIC18.83■□□□□ 0.6
PDE6CP51160 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE6CP51160 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6CP51160 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDE6CP51160 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6CP51160 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PDE6CP51160 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6CP51160 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6CP51160 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6CP51160 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6CP51160 AC125634.1-201ENST00000438758 1403 ntBASIC18.83■□□□□ 0.6
PDE6CP51160 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE6CP51160 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDE6CP51160 LYSMD4-203ENST00000378904 2122 ntBASIC18.82■□□□□ 0.6
PDE6CP51160 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
PDE6CP51160 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 SAPCD2P3-201ENST00000455031 850 ntBASIC18.82■□□□□ 0.6
PDE6CP51160 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 AC096582.2-201ENST00000510860 516 ntBASIC18.82■□□□□ 0.6
PDE6CP51160 AC009533.2-201ENST00000543664 586 ntBASIC18.82■□□□□ 0.6
PDE6CP51160 AL160237.2-201ENST00000556165 472 ntBASIC18.82■□□□□ 0.6
PDE6CP51160 AC005336.2-201ENST00000593183 939 ntBASIC18.82■□□□□ 0.6
PDE6CP51160 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDE6CP51160 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PDE6CP51160 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6CP51160 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.82■□□□□ 0.6
PDE6CP51160 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6CP51160 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDE6CP51160 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.81■□□□□ 0.6
PDE6CP51160 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDE6CP51160 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDE6CP51160 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.81■□□□□ 0.6
PDE6CP51160 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 AC091607.1-201ENST00000490318 1060 ntBASIC18.81■□□□□ 0.6
PDE6CP51160 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PDE6CP51160 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.81■□□□□ 0.6
PDE6CP51160 BNIP3P18-201ENST00000593976 575 ntBASIC18.81■□□□□ 0.6
PDE6CP51160 AL121912.1-201ENST00000603683 238 ntBASIC18.81■□□□□ 0.6
PDE6CP51160 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.81■□□□□ 0.6
PDE6CP51160 AL138831.2-201ENST00000606564 490 ntBASIC18.81■□□□□ 0.6
PDE6CP51160 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PDE6CP51160 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.81■□□□□ 0.6
PDE6CP51160 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.81■□□□□ 0.6
PDE6CP51160 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDE6CP51160 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6CP51160 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.81■□□□□ 0.6
PDE6CP51160 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms