Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HLCSP50747 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.69■□□□□ 0.26
HLCSP50747 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.69■□□□□ 0.26
HLCSP50747 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.69■□□□□ 0.26
HLCSP50747 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.69■□□□□ 0.26
HLCSP50747 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.69■□□□□ 0.26
HLCSP50747 AC074051.2-201ENST00000565115 352 ntBASIC16.69■□□□□ 0.26
HLCSP50747 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.69■□□□□ 0.26
HLCSP50747 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.69■□□□□ 0.26
HLCSP50747 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.69■□□□□ 0.26
HLCSP50747 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.69■□□□□ 0.26
HLCSP50747 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.69■□□□□ 0.26
HLCSP50747 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
HLCSP50747 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HLCSP50747 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
HLCSP50747 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.69■□□□□ 0.26
HLCSP50747 CROCCP2-202ENST00000412962 2773 ntBASIC16.69■□□□□ 0.26
HLCSP50747 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLCSP50747 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.68■□□□□ 0.26
HLCSP50747 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 TSPY12P-201ENST00000421279 868 ntBASIC16.68■□□□□ 0.26
HLCSP50747 AC246785.2-201ENST00000432512 513 ntBASIC16.68■□□□□ 0.26
HLCSP50747 KRT17P6-201ENST00000453795 1220 ntBASIC16.68■□□□□ 0.26
HLCSP50747 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HLCSP50747 AL121894.2-201ENST00000602977 491 ntBASIC16.68■□□□□ 0.26
HLCSP50747 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.68■□□□□ 0.26
HLCSP50747 AL121772.3-201ENST00000610840 674 ntBASIC16.68■□□□□ 0.26
HLCSP50747 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.68■□□□□ 0.26
HLCSP50747 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HLCSP50747 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLCSP50747 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.68■□□□□ 0.26
HLCSP50747 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.68■□□□□ 0.26
HLCSP50747 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.68■□□□□ 0.26
HLCSP50747 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLCSP50747 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HLCSP50747 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HLCSP50747 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLCSP50747 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.67■□□□□ 0.26
HLCSP50747 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.67■□□□□ 0.26
HLCSP50747 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLCSP50747 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.67■□□□□ 0.26
HLCSP50747 AC111152.3-201ENST00000569699 673 ntBASIC16.67■□□□□ 0.26
HLCSP50747 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.67■□□□□ 0.26
HLCSP50747 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 LINC00167-201ENST00000530583 1419 ntBASIC16.67■□□□□ 0.26
HLCSP50747 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLCSP50747 DOC2GP-204ENST00000639052 2548 ntBASIC16.67■□□□□ 0.26
HLCSP50747 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLCSP50747 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms