Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CSNK1DP48730 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CSNK1DP48730 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.41■□□□□ 0.38
CSNK1DP48730 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.41■□□□□ 0.38
CSNK1DP48730 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 AL590627.1-203ENST00000421194 1026 ntBASIC17.41■□□□□ 0.38
CSNK1DP48730 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1DP48730 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 RPS15P9-201ENST00000494093 319 ntBASIC17.41■□□□□ 0.38
CSNK1DP48730 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1DP48730 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.41■□□□□ 0.38
CSNK1DP48730 AC008667.4-201ENST00000607370 168 ntBASIC17.41■□□□□ 0.38
CSNK1DP48730 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.41■□□□□ 0.38
CSNK1DP48730 AC117500.6-201ENST00000624871 588 ntBASIC17.41■□□□□ 0.38
CSNK1DP48730 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1DP48730 AF228730.7-201ENST00000641842 219 ntBASIC17.41■□□□□ 0.38
CSNK1DP48730 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1DP48730 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.41■□□□□ 0.38
CSNK1DP48730 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1DP48730 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CSNK1DP48730 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CSNK1DP48730 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
CSNK1DP48730 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CSNK1DP48730 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1DP48730 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CSNK1DP48730 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.4■□□□□ 0.38
CSNK1DP48730 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.4■□□□□ 0.38
CSNK1DP48730 IGHV3-65-201ENST00000523210 341 ntBASIC17.4■□□□□ 0.38
CSNK1DP48730 AC145285.3-201ENST00000564603 959 ntBASIC17.4■□□□□ 0.38
CSNK1DP48730 GGTLC5P-201ENST00000617623 998 ntBASIC17.4■□□□□ 0.38
CSNK1DP48730 CROCCP2-202ENST00000412962 2773 ntBASIC17.4■□□□□ 0.38
CSNK1DP48730 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1DP48730 EGFEM1P-202ENST00000431685 1563 ntBASIC17.4■□□□□ 0.38
CSNK1DP48730 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1DP48730 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1DP48730 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1DP48730 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CSNK1DP48730 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1DP48730 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1DP48730 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CSNK1DP48730 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CSNK1DP48730 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.39■□□□□ 0.37
CSNK1DP48730 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.39■□□□□ 0.37
CSNK1DP48730 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CSNK1DP48730 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.39■□□□□ 0.37
CSNK1DP48730 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1DP48730 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
CSNK1DP48730 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.39■□□□□ 0.37
CSNK1DP48730 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1DP48730 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CSNK1DP48730 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CSNK1DP48730 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1DP48730 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CSNK1DP48730 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1DP48730 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSNK1DP48730 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
CSNK1DP48730 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1DP48730 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms