Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.56■□□□□ 0.24
RORAP35398 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RORAP35398 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.56■□□□□ 0.24
RORAP35398 MED15P5-201ENST00000423150 992 ntBASIC16.56■□□□□ 0.24
RORAP35398 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.56■□□□□ 0.24
RORAP35398 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.56■□□□□ 0.24
RORAP35398 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.56■□□□□ 0.24
RORAP35398 AC009947.1-201ENST00000444350 727 ntBASIC16.56■□□□□ 0.24
RORAP35398 AC136632.2-201ENST00000512891 861 ntBASIC16.56■□□□□ 0.24
RORAP35398 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.56■□□□□ 0.24
RORAP35398 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.56■□□□□ 0.24
RORAP35398 MIR1199-201ENST00000621445 119 ntBASIC16.56■□□□□ 0.24
RORAP35398 PGM5P2-202ENST00000637225 1043 ntBASIC16.56■□□□□ 0.24
RORAP35398 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RORAP35398 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RORAP35398 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RORAP35398 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RORAP35398 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.55■□□□□ 0.24
RORAP35398 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 AC007613.1-201ENST00000572811 2597 ntBASIC16.55■□□□□ 0.24
RORAP35398 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.55■□□□□ 0.24
RORAP35398 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 KRT18P13-201ENST00000400056 1290 ntBASIC16.55■□□□□ 0.24
RORAP35398 AC005104.2-201ENST00000427818 678 ntBASIC16.55■□□□□ 0.24
RORAP35398 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.55■□□□□ 0.24
RORAP35398 SIGLEC30P-201ENST00000455569 941 ntBASIC16.55■□□□□ 0.24
RORAP35398 AC002558.1-201ENST00000488906 803 ntBASIC16.55■□□□□ 0.24
RORAP35398 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.55■□□□□ 0.24
RORAP35398 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RORAP35398 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RORAP35398 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RORAP35398 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
RORAP35398 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RORAP35398 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RORAP35398 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.55■□□□□ 0.24
RORAP35398 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RORAP35398 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.54■□□□□ 0.24
RORAP35398 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RORAP35398 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RORAP35398 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.54■□□□□ 0.24
RORAP35398 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.54■□□□□ 0.24
RORAP35398 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.54■□□□□ 0.24
RORAP35398 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.54■□□□□ 0.24
RORAP35398 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.54■□□□□ 0.24
RORAP35398 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.54■□□□□ 0.24
RORAP35398 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.54■□□□□ 0.24
RORAP35398 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RORAP35398 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.54■□□□□ 0.24
RORAP35398 IGHV3-52-201ENST00000519770 353 ntBASIC16.54■□□□□ 0.24
RORAP35398 AC005593.1-201ENST00000624894 515 ntBASIC16.54■□□□□ 0.24
RORAP35398 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RORAP35398 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 FZD10-202ENST00000539839 3282 ntBASIC16.54■□□□□ 0.24
RORAP35398 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.54■□□□□ 0.24
RORAP35398 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.54■□□□□ 0.24
RORAP35398 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RORAP35398 NCF1C-201ENST00000438382 1427 ntBASIC16.53■□□□□ 0.24
RORAP35398 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RORAP35398 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms