Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.22■□□□□ 0.19
GABRA3P34903 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.22■□□□□ 0.19
GABRA3P34903 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GABRA3P34903 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.22■□□□□ 0.19
GABRA3P34903 STK25P1-201ENST00000585406 838 ntBASIC16.22■□□□□ 0.19
GABRA3P34903 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 AD001527.2-201ENST00000622994 785 ntBASIC16.22■□□□□ 0.19
GABRA3P34903 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GABRA3P34903 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GABRA3P34903 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.22■□□□□ 0.19
GABRA3P34903 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GABRA3P34903 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GABRA3P34903 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.21■□□□□ 0.19
GABRA3P34903 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.21■□□□□ 0.19
GABRA3P34903 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.21■□□□□ 0.19
GABRA3P34903 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.21■□□□□ 0.19
GABRA3P34903 FOSL1P1-201ENST00000511041 816 ntBASIC16.21■□□□□ 0.19
GABRA3P34903 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.21■□□□□ 0.19
GABRA3P34903 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.21■□□□□ 0.19
GABRA3P34903 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.21■□□□□ 0.19
GABRA3P34903 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.21■□□□□ 0.19
GABRA3P34903 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GABRA3P34903 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.21■□□□□ 0.19
GABRA3P34903 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 AC046185.3-201ENST00000623228 1824 ntBASIC16.21■□□□□ 0.19
GABRA3P34903 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.21■□□□□ 0.19
GABRA3P34903 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GABRA3P34903 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GABRA3P34903 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
GABRA3P34903 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
GABRA3P34903 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
GABRA3P34903 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
GABRA3P34903 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GABRA3P34903 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
GABRA3P34903 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GABRA3P34903 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.2■□□□□ 0.18
GABRA3P34903 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.2■□□□□ 0.18
GABRA3P34903 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.2■□□□□ 0.18
GABRA3P34903 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.2■□□□□ 0.18
GABRA3P34903 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GABRA3P34903 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.2■□□□□ 0.18
GABRA3P34903 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.2■□□□□ 0.18
GABRA3P34903 KRT16P4-201ENST00000453883 522 ntBASIC16.2■□□□□ 0.18
GABRA3P34903 STK19B-204ENST00000512515 211 ntBASIC16.2■□□□□ 0.18
GABRA3P34903 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.2■□□□□ 0.18
GABRA3P34903 AL591684.3-201ENST00000605187 298 ntBASIC16.2■□□□□ 0.18
GABRA3P34903 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
GABRA3P34903 AC073592.5-201ENST00000624854 528 ntBASIC16.2■□□□□ 0.18
GABRA3P34903 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GABRA3P34903 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
GABRA3P34903 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.2■□□□□ 0.18
GABRA3P34903 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.2■□□□□ 0.18
GABRA3P34903 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABRA3P34903 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.2■□□□□ 0.18
GABRA3P34903 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.19■□□□□ 0.18
GABRA3P34903 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
GABRA3P34903 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.19■□□□□ 0.18
GABRA3P34903 AC132938.5-201ENST00000624980 1813 ntBASIC16.19■□□□□ 0.18
GABRA3P34903 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GABRA3P34903 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABRA3P34903 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GABRA3P34903 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABRA3P34903 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABRA3P34903 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABRA3P34903 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABRA3P34903 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms