Protein–RNA interactions for Protein: P32455

GBP1, Guanylate-binding protein 1, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBP1P32455 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.66■□□□□ 0.58
GBP1P32455 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GBP1P32455 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
GBP1P32455 AL355312.1-201ENST00000407115 2176 ntBASIC18.66■□□□□ 0.58
GBP1P32455 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.66■□□□□ 0.58
GBP1P32455 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GBP1P32455 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.65■□□□□ 0.58
GBP1P32455 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.65■□□□□ 0.58
GBP1P32455 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GBP1P32455 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 TNRC18P3-201ENST00000441896 2691 ntBASIC18.65■□□□□ 0.58
GBP1P32455 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GBP1P32455 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
GBP1P32455 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.65■□□□□ 0.58
GBP1P32455 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.65■□□□□ 0.58
GBP1P32455 AC006538.3-201ENST00000612495 578 ntBASIC18.65■□□□□ 0.58
GBP1P32455 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 AC233702.3-201ENST00000578656 1387 ntBASIC18.65■□□□□ 0.58
GBP1P32455 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.65■□□□□ 0.58
GBP1P32455 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GBP1P32455 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GBP1P32455 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GBP1P32455 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
GBP1P32455 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GBP1P32455 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
GBP1P32455 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.64■□□□□ 0.57
GBP1P32455 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.64■□□□□ 0.57
GBP1P32455 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GBP1P32455 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GBP1P32455 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GBP1P32455 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GBP1P32455 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GBP1P32455 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.63■□□□□ 0.57
GBP1P32455 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GBP1P32455 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
GBP1P32455 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.63■□□□□ 0.57
GBP1P32455 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.63■□□□□ 0.57
GBP1P32455 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.63■□□□□ 0.57
GBP1P32455 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.63■□□□□ 0.57
GBP1P32455 AP002469.2-201ENST00000531724 424 ntBASIC18.63■□□□□ 0.57
GBP1P32455 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.63■□□□□ 0.57
GBP1P32455 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 AL662844.1-201ENST00000546340 181 ntBASIC18.63■□□□□ 0.57
GBP1P32455 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
GBP1P32455 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.63■□□□□ 0.57
GBP1P32455 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.63■□□□□ 0.57
GBP1P32455 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.63■□□□□ 0.57
GBP1P32455 AC099336.1-202ENST00000602961 463 ntBASIC18.63■□□□□ 0.57
GBP1P32455 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.63■□□□□ 0.57
GBP1P32455 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GBP1P32455 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms