Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 PGAM5P1-201ENST00000518923 814 ntBASIC19.79■□□□□ 0.76
HOXA13P31271 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.79■□□□□ 0.76
HOXA13P31271 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HOXA13P31271 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.79■□□□□ 0.76
HOXA13P31271 FAM197Y3-203ENST00000618346 717 ntBASIC19.79■□□□□ 0.76
HOXA13P31271 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 GPR89P-201ENST00000407924 1495 ntBASIC19.79■□□□□ 0.76
HOXA13P31271 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HOXA13P31271 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXA13P31271 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
HOXA13P31271 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HOXA13P31271 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HOXA13P31271 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HOXA13P31271 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXA13P31271 ACTG1P4-201ENST00000425123 1122 ntBASIC19.78■□□□□ 0.76
HOXA13P31271 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXA13P31271 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.78■□□□□ 0.76
HOXA13P31271 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.78■□□□□ 0.76
HOXA13P31271 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 IGHV3-65-201ENST00000523210 341 ntBASIC19.78■□□□□ 0.76
HOXA13P31271 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HOXA13P31271 AC008667.4-201ENST00000607370 168 ntBASIC19.78■□□□□ 0.76
HOXA13P31271 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.78■□□□□ 0.76
HOXA13P31271 AL805961.1-202ENST00000641562 540 ntBASIC19.78■□□□□ 0.76
HOXA13P31271 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
HOXA13P31271 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXA13P31271 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
HOXA13P31271 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA13P31271 AL590787.1-201ENST00000568856 1315 ntBASIC19.77■□□□□ 0.76
HOXA13P31271 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HOXA13P31271 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 NOC2LP2-201ENST00000407594 1944 ntBASIC19.77■□□□□ 0.76
HOXA13P31271 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HOXA13P31271 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HOXA13P31271 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXA13P31271 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXA13P31271 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HOXA13P31271 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXA13P31271 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXA13P31271 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXA13P31271 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXA13P31271 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
HOXA13P31271 AC004790.2-201ENST00000623588 572 ntBASIC19.77■□□□□ 0.76
HOXA13P31271 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXA13P31271 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HOXA13P31271 FZD10-202ENST00000539839 3282 ntBASIC19.77■□□□□ 0.76
HOXA13P31271 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXA13P31271 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXA13P31271 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA13P31271 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.75
HOXA13P31271 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA13P31271 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HOXA13P31271 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA13P31271 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA13P31271 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HOXA13P31271 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA13P31271 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA13P31271 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HOXA13P31271 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
HOXA13P31271 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA13P31271 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HOXA13P31271 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.76■□□□□ 0.75
HOXA13P31271 AL591424.1-201ENST00000442569 1213 ntBASIC19.76■□□□□ 0.75
HOXA13P31271 KRT18P2-201ENST00000447938 1258 ntBASIC19.76■□□□□ 0.75
HOXA13P31271 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms