Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 AL355994.2-201ENST00000447882 704 ntBASIC22.51■■□□□ 1.19
RXRBP28702 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RXRBP28702 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC22.51■■□□□ 1.19
RXRBP28702 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC22.51■■□□□ 1.19
RXRBP28702 FOS-206ENST00000555347 1280 ntTSL 2 BASIC22.51■■□□□ 1.19
RXRBP28702 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC22.51■■□□□ 1.19
RXRBP28702 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.51■■□□□ 1.19
RXRBP28702 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RXRBP28702 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RXRBP28702 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RXRBP28702 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RXRBP28702 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC22.5■■□□□ 1.19
RXRBP28702 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RXRBP28702 STX1A-203ENST00000395155 783 ntTSL 2 BASIC22.5■■□□□ 1.19
RXRBP28702 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RXRBP28702 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC22.5■■□□□ 1.19
RXRBP28702 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC22.5■■□□□ 1.19
RXRBP28702 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RXRBP28702 AGER-214ENST00000538695 487 ntTSL 2 BASIC22.5■■□□□ 1.19
RXRBP28702 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.5■■□□□ 1.19
RXRBP28702 AC005412.3-201ENST00000580309 715 ntBASIC22.5■■□□□ 1.19
RXRBP28702 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC22.5■■□□□ 1.19
RXRBP28702 AC004790.1-201ENST00000612686 536 ntBASIC22.5■■□□□ 1.19
RXRBP28702 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RXRBP28702 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC22.5■■□□□ 1.19
RXRBP28702 TUBB1P2-201ENST00000422712 1306 ntBASIC22.5■■□□□ 1.19
RXRBP28702 TUBB1P1-201ENST00000503144 1300 ntBASIC22.5■■□□□ 1.19
RXRBP28702 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.5■■□□□ 1.19
RXRBP28702 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.5■■□□□ 1.19
RXRBP28702 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.5■■□□□ 1.19
RXRBP28702 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.5■■□□□ 1.19
RXRBP28702 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RXRBP28702 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
RXRBP28702 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
RXRBP28702 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.49■■□□□ 1.19
RXRBP28702 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC22.49■■□□□ 1.19
RXRBP28702 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC22.49■■□□□ 1.19
RXRBP28702 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RXRBP28702 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC22.49■■□□□ 1.19
RXRBP28702 MIR3615-201ENST00000581999 87 ntBASIC22.49■■□□□ 1.19
RXRBP28702 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC22.49■■□□□ 1.19
RXRBP28702 AL589739.1-201ENST00000607720 493 ntBASIC22.49■■□□□ 1.19
RXRBP28702 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.49■■□□□ 1.19
RXRBP28702 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.49■■□□□ 1.19
RXRBP28702 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.49■■□□□ 1.19
RXRBP28702 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RXRBP28702 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RXRBP28702 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC22.48■■□□□ 1.19
RXRBP28702 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.48■■□□□ 1.19
RXRBP28702 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RXRBP28702 AL032819.2-201ENST00000624543 2162 ntBASIC22.48■■□□□ 1.19
RXRBP28702 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
RXRBP28702 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC22.48■■□□□ 1.19
RXRBP28702 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC22.48■■□□□ 1.19
RXRBP28702 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
RXRBP28702 AC142381.1-201ENST00000426099 345 ntBASIC22.48■■□□□ 1.19
RXRBP28702 RASL12-203ENST00000434605 982 ntTSL 2 BASIC22.48■■□□□ 1.19
RXRBP28702 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC22.48■■□□□ 1.19
RXRBP28702 MYCLP2-201ENST00000449268 967 ntBASIC22.48■■□□□ 1.19
RXRBP28702 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC22.48■■□□□ 1.19
RXRBP28702 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.48■■□□□ 1.19
RXRBP28702 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC22.48■■□□□ 1.19
RXRBP28702 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RXRBP28702 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.48■■□□□ 1.19
RXRBP28702 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms