Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.88■□□□□ 0.29
LAMA1P25391 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.88■□□□□ 0.29
LAMA1P25391 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.88■□□□□ 0.29
LAMA1P25391 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.88■□□□□ 0.29
LAMA1P25391 AL135999.2-201ENST00000622438 1686 ntBASIC16.88■□□□□ 0.29
LAMA1P25391 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.88■□□□□ 0.29
LAMA1P25391 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LAMA1P25391 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LAMA1P25391 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LAMA1P25391 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.88■□□□□ 0.29
LAMA1P25391 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.88■□□□□ 0.29
LAMA1P25391 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LAMA1P25391 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LAMA1P25391 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
LAMA1P25391 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.87■□□□□ 0.29
LAMA1P25391 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.87■□□□□ 0.29
LAMA1P25391 AC084121.4-201ENST00000641598 221 ntBASIC16.87■□□□□ 0.29
LAMA1P25391 AF228730.8-201ENST00000642140 221 ntBASIC16.87■□□□□ 0.29
LAMA1P25391 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LAMA1P25391 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LAMA1P25391 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.87■□□□□ 0.29
LAMA1P25391 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.87■□□□□ 0.29
LAMA1P25391 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.87■□□□□ 0.29
LAMA1P25391 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.87■□□□□ 0.29
LAMA1P25391 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LAMA1P25391 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.87■□□□□ 0.29
LAMA1P25391 AC092580.3-201ENST00000430932 139 ntBASIC16.87■□□□□ 0.29
LAMA1P25391 RN7SL589P-201ENST00000481268 310 ntBASIC16.87■□□□□ 0.29
LAMA1P25391 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.87■□□□□ 0.29
LAMA1P25391 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LAMA1P25391 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.87■□□□□ 0.29
LAMA1P25391 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LAMA1P25391 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LAMA1P25391 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.86■□□□□ 0.29
LAMA1P25391 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.86■□□□□ 0.29
LAMA1P25391 AC107918.2-201ENST00000530817 355 ntBASIC16.86■□□□□ 0.29
LAMA1P25391 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.86■□□□□ 0.29
LAMA1P25391 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.86■□□□□ 0.29
LAMA1P25391 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.86■□□□□ 0.29
LAMA1P25391 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.86■□□□□ 0.29
LAMA1P25391 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.86■□□□□ 0.29
LAMA1P25391 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 LINC01225-203ENST00000563550 1244 ntBASIC16.86■□□□□ 0.29
LAMA1P25391 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.86■□□□□ 0.29
LAMA1P25391 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LAMA1P25391 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LAMA1P25391 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LAMA1P25391 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms