Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP24386 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP24386 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.31■□□□□ 0.2
CHMP24386 AC011840.4-201ENST00000578471 627 ntBASIC16.31■□□□□ 0.2
CHMP24386 CLEC4GP1-201ENST00000596555 870 ntBASIC16.31■□□□□ 0.2
CHMP24386 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP24386 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP24386 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHMP24386 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP24386 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP24386 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP24386 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHMP24386 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 LINC00167-201ENST00000530583 1419 ntBASIC16.3■□□□□ 0.2
CHMP24386 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP24386 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CHMP24386 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CHMP24386 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.3■□□□□ 0.2
CHMP24386 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP24386 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP24386 LINC00265-3P-201ENST00000447588 903 ntBASIC16.3■□□□□ 0.2
CHMP24386 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 TOB2P1-201ENST00000469761 992 ntBASIC16.3■□□□□ 0.2
CHMP24386 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
CHMP24386 Z69720.1-201ENST00000601483 472 ntBASIC16.3■□□□□ 0.2
CHMP24386 AL353801.3-201ENST00000609898 542 ntBASIC16.3■□□□□ 0.2
CHMP24386 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP24386 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP24386 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP24386 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP24386 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CHMP24386 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP24386 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CHMP24386 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.29■□□□□ 0.2
CHMP24386 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP24386 AC233702.3-201ENST00000578656 1387 ntBASIC16.29■□□□□ 0.2
CHMP24386 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CHMP24386 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CHMP24386 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP24386 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHMP24386 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHMP24386 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 NUS1P1-201ENST00000446295 882 ntBASIC16.29■□□□□ 0.2
CHMP24386 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CHMP24386 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP24386 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms