Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNA3P22001 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.12■□□□□ 0.97
KCNA3P22001 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 AC022144.1-201ENST00000602255 1580 ntBASIC21.12■□□□□ 0.97
KCNA3P22001 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.12■□□□□ 0.97
KCNA3P22001 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.12■□□□□ 0.97
KCNA3P22001 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.12■□□□□ 0.97
KCNA3P22001 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
KCNA3P22001 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
KCNA3P22001 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.12■□□□□ 0.97
KCNA3P22001 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.12■□□□□ 0.97
KCNA3P22001 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
KCNA3P22001 AC046185.3-201ENST00000623228 1824 ntBASIC21.12■□□□□ 0.97
KCNA3P22001 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNA3P22001 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNA3P22001 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNA3P22001 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNA3P22001 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
KCNA3P22001 KRT17P7-201ENST00000451704 1104 ntBASIC21.11■□□□□ 0.97
KCNA3P22001 IGHV3-71-201ENST00000523324 359 ntBASIC21.11■□□□□ 0.97
KCNA3P22001 AC109635.5-201ENST00000533593 962 ntBASIC21.11■□□□□ 0.97
KCNA3P22001 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.11■□□□□ 0.97
KCNA3P22001 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNA3P22001 AC010336.2-201ENST00000564226 506 ntBASIC21.11■□□□□ 0.97
KCNA3P22001 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
KCNA3P22001 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 AC004233.3-201ENST00000607794 1269 ntBASIC21.11■□□□□ 0.97
KCNA3P22001 AC008267.7-201ENST00000624570 1194 ntBASIC21.11■□□□□ 0.97
KCNA3P22001 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNA3P22001 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.11■□□□□ 0.97
KCNA3P22001 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNA3P22001 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KCNA3P22001 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA3P22001 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA3P22001 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA3P22001 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KCNA3P22001 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA3P22001 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA3P22001 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KCNA3P22001 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNA3P22001 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
KCNA3P22001 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNA3P22001 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA3P22001 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA3P22001 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA3P22001 AL606495.2-201ENST00000605867 535 ntBASIC21.1■□□□□ 0.97
KCNA3P22001 AC073592.8-201ENST00000624126 511 ntBASIC21.1■□□□□ 0.97
KCNA3P22001 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNA3P22001 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KCNA3P22001 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNA3P22001 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA3P22001 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNA3P22001 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.09■□□□□ 0.97
KCNA3P22001 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KCNA3P22001 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.09■□□□□ 0.97
KCNA3P22001 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.09■□□□□ 0.97
KCNA3P22001 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.09■□□□□ 0.97
KCNA3P22001 HILS1-202ENST00000545329 423 ntBASIC21.09■□□□□ 0.97
KCNA3P22001 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 TP53TG3HP-202ENST00000569755 579 ntBASIC21.09■□□□□ 0.97
KCNA3P22001 AC027307.2-201ENST00000591252 911 ntBASIC21.09■□□□□ 0.97
KCNA3P22001 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.09■□□□□ 0.97
KCNA3P22001 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.09■□□□□ 0.97
KCNA3P22001 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.09■□□□□ 0.97
KCNA3P22001 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.09■□□□□ 0.97
KCNA3P22001 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms