| TFE3 | P19532 | AL691432.3-201 | ENST00000621860 | 400 nt | BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | ANKMY2-206 | ENST00000628652 | 1270 nt | TSL 5 BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | NABP2-201 | ENST00000267023 | 1417 nt | APPRIS P1 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TRAF3IP1-201 | ENST00000373327 | 4279 nt | APPRIS P3 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CLSTN1-202 | ENST00000377298 | 5221 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC009779.2-201 | ENST00000552576 | 1443 nt | TSL 4 BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC138969.1-205 | ENST00000381497 | 1552 nt | APPRIS P1 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | E2F2-201 | ENST00000361729 | 5191 nt | APPRIS P1 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC003002.1-202 | ENST00000596755 | 1743 nt | APPRIS P1 BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | KCNJ2-AS1-201 | ENST00000590966 | 2442 nt | BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | RALGAPA1-219 | ENST00000637992 | 8512 nt | TSL 5 BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | FAM69C-201 | ENST00000343998 | 3671 nt | APPRIS P1 TSL 5 BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TINF2-201 | ENST00000267415 | 1852 nt | APPRIS P4 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | WT1-201 | ENST00000332351 | 3122 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | GALNT14-202 | ENST00000349752 | 2733 nt | APPRIS P1 TSL 1 (best) BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | OSBP2-202 | ENST00000401475 | 2468 nt | TSL 2 BASIC | 18.2 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TMEM145-201 | ENST00000301204 | 1768 nt | APPRIS P2 TSL 2 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | STX17-205 | ENST00000525640 | 2523 nt | APPRIS P1 TSL 2 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PEX13-204 | ENST00000444100 | 1533 nt | TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | WDR1-205 | ENST00000502702 | 1691 nt | TSL 5 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CHAC1-202 | ENST00000446533 | 1849 nt | TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CTSB-232 | ENST00000534510 | 1989 nt | APPRIS P1 TSL 5 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PFN2-201 | ENST00000239940 | 2261 nt | APPRIS P3 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PPP1R16A-202 | ENST00000435887 | 2273 nt | APPRIS P1 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SKIDA1-202 | ENST00000449193 | 6598 nt | APPRIS P2 TSL 3 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | RBFA-202 | ENST00000306735 | 1407 nt | APPRIS P1 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SWI5-201 | ENST00000320188 | 980 nt | APPRIS P3 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SLC25A1P3-201 | ENST00000395415 | 828 nt | BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CENPM-203 | ENST00000402338 | 1002 nt | TSL 2 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CYCS-202 | ENST00000409409 | 974 nt | APPRIS P1 TSL 3 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AL450487.1-201 | ENST00000426799 | 995 nt | BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | FGFR3P6-201 | ENST00000457012 | 610 nt | BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | NDUFA6-202 | ENST00000498737 | 1256 nt | TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TMEM218-203 | ENST00000526175 | 972 nt | APPRIS P1 TSL 3 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | KRT126P-201 | ENST00000549467 | 1181 nt | BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | NDUFA6-203 | ENST00000602404 | 1080 nt | APPRIS P1 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CHAC1-204 | ENST00000617768 | 1560 nt | TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CLUH-201 | ENST00000435359 | 5224 nt | APPRIS P2 TSL 5 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | GGNBP2-212 | ENST00000613102 | 2847 nt | APPRIS P1 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | GHRHR-201 | ENST00000326139 | 1602 nt | APPRIS P1 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC079776.2-201 | ENST00000641154 | 1609 nt | BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SSC5D-202 | ENST00000587166 | 3017 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | RUNX1-207 | ENST00000437180 | 5967 nt | APPRIS P3 TSL 5 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | KIAA0895-208 | ENST00000440378 | 2441 nt | APPRIS P1 TSL 1 (best) BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TNIP1-221 | ENST00000610874 | 2629 nt | TSL 5 BASIC | 18.19 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SWSAP1-201 | ENST00000312423 | 1684 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CNOT6-202 | ENST00000393356 | 6303 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SP3-203 | ENST00000418194 | 3937 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PIR-202 | ENST00000380421 | 1539 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | BEST2-202 | ENST00000549706 | 2183 nt | APPRIS P1 TSL 5 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | GRAMD1B-214 | ENST00000635736 | 2814 nt | APPRIS P1 TSL 5 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | GOLGA2P9-203 | ENST00000600260 | 2033 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | WASF1-205 | ENST00000392587 | 2675 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | POM121C-208 | ENST00000615331 | 5835 nt | APPRIS P2 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TRIM17-204 | ENST00000366698 | 1748 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PWP1-202 | ENST00000541166 | 1722 nt | TSL 2 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | JMJD4-201 | ENST00000366758 | 2595 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | RUVBL1-201 | ENST00000322623 | 1761 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | LINC00905-202 | ENST00000588117 | 1768 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | HSF2-202 | ENST00000452194 | 2643 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SEMA3C-201 | ENST00000265361 | 5174 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | NDUFS7-201 | ENST00000233627 | 1039 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | MCRIP2-201 | ENST00000307650 | 946 nt | APPRIS P1 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC003669.1-201 | ENST00000334569 | 611 nt | BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CMTM1-204 | ENST00000336328 | 606 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TLE1-202 | ENST00000376484 | 666 nt | TSL 3 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PODXL-202 | ENST00000378555 | 2105 nt | APPRIS P3 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SRP19-202 | ENST00000445150 | 833 nt | TSL 2 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SAPCD2P3-201 | ENST00000455031 | 850 nt | BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | BX005266.1-201 | ENST00000473402 | 457 nt | BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TNFSF13-208 | ENST00000483039 | 959 nt | TSL 2 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SMN1-203 | ENST00000503079 | 1219 nt | TSL 5 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | ANKRD13D-218 | ENST00000515828 | 1111 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | CMTM1-213 | ENST00000529506 | 581 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PAM16-208 | ENST00000573553 | 722 nt | TSL 2 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | FGF11-204 | ENST00000575235 | 928 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC008608.2-201 | ENST00000606089 | 416 nt | BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AL355877.3-201 | ENST00000622820 | 899 nt | BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC064853.6-201 | ENST00000642029 | 303 nt | APPRIS P1 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | ADRA1A-206 | ENST00000380586 | 2304 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | WDR90-202 | ENST00000315764 | 1454 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PCCB-209 | ENST00000469217 | 1841 nt | APPRIS ALT2 TSL 2 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | NOL4L-205 | ENST00000375678 | 2042 nt | APPRIS ALT2 TSL 2 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | GCAT-202 | ENST00000323205 | 1656 nt | TSL 2 BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AL135999.2-201 | ENST00000622438 | 1686 nt | BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | ERLEC1-201 | ENST00000185150 | 2433 nt | APPRIS P3 TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | EVPL-202 | ENST00000586740 | 6223 nt | TSL 1 (best) BASIC | 18.18 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | ZIC1-201 | ENST00000282928 | 5241 nt | APPRIS P1 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | ALDH5A1-202 | ENST00000357578 | 5248 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PCSK5-201 | ENST00000376752 | 5756 nt | APPRIS P3 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TSPAN7-202 | ENST00000378482 | 1909 nt | APPRIS P1 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AMZ2-203 | ENST00000392720 | 1378 nt | APPRIS P1 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | TFAP2A-AS1-201 | ENST00000420777 | 1575 nt | TSL 5 BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | IGSF8-201 | ENST00000314485 | 2343 nt | APPRIS P2 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | PTGDR-201 | ENST00000306051 | 2942 nt | APPRIS P1 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | GJA3-201 | ENST00000241125 | 5211 nt | APPRIS P1 TSL 3 BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | ABHD11-205 | ENST00000437775 | 1447 nt | APPRIS ALT2 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | SQSTM1-202 | ENST00000389805 | 2986 nt | APPRIS P1 TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | LYPLAL1-201 | ENST00000366927 | 1819 nt | TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |
| TFE3 | P19532 | AC005498.3-201 | ENST00000596587 | 2045 nt | TSL 1 (best) BASIC | 18.17 | ■□□□□ 0.5 | | |