Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN2P17655 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN2P17655 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CAPN2P17655 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN2P17655 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
CAPN2P17655 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.04■□□□□ 0.8
CAPN2P17655 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN2P17655 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.04■□□□□ 0.8
CAPN2P17655 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CAPN2P17655 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 IRX1P1-201ENST00000438849 1838 ntBASIC20.04■□□□□ 0.8
CAPN2P17655 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CAPN2P17655 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CAPN2P17655 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPN2P17655 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPN2P17655 AC092474.2-201ENST00000424288 719 ntBASIC20.03■□□□□ 0.8
CAPN2P17655 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPN2P17655 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.03■□□□□ 0.8
CAPN2P17655 VN2R19P-201ENST00000442399 1052 ntBASIC20.03■□□□□ 0.8
CAPN2P17655 AC122714.2-201ENST00000502787 707 ntBASIC20.03■□□□□ 0.8
CAPN2P17655 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CAPN2P17655 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPN2P17655 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.03■□□□□ 0.8
CAPN2P17655 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPN2P17655 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPN2P17655 AC106028.4-201ENST00000614509 607 ntBASIC20.03■□□□□ 0.8
CAPN2P17655 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPN2P17655 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.03■□□□□ 0.8
CAPN2P17655 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN2P17655 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CAPN2P17655 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CAPN2P17655 BCL2-203ENST00000589955 5011 ntBASIC20.02■□□□□ 0.8
CAPN2P17655 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN2P17655 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN2P17655 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN2P17655 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN2P17655 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CAPN2P17655 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN2P17655 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CAPN2P17655 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN2P17655 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN2P17655 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN2P17655 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN2P17655 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CAPN2P17655 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN2P17655 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CAPN2P17655 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.02■□□□□ 0.79
CAPN2P17655 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN2P17655 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN2P17655 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN2P17655 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN2P17655 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN2P17655 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN2P17655 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.02■□□□□ 0.79
CAPN2P17655 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.02■□□□□ 0.79
CAPN2P17655 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN2P17655 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CAPN2P17655 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CAPN2P17655 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPN2P17655 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CAPN2P17655 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN2P17655 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN2P17655 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN2P17655 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN2P17655 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.01■□□□□ 0.79
CAPN2P17655 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN2P17655 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.01■□□□□ 0.79
CAPN2P17655 TSEN15P1-201ENST00000423257 515 ntBASIC20.01■□□□□ 0.79
CAPN2P17655 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms